Data Analyst III - Enhancer Genomics

Data Analyst III Enhancer Genomics Molecular Genetics

The mission of the Allen Institute is to unlock the complexities of bioscience and advance our knowledge to improve human health.

Using an open science, multi-scale, team-oriented approach, the Allen Institute focuses on accelerating foundational research, developing standards and models, and cultivating new ideas to make a broad, transformational impact on science.

In order to make an application, simply read through the following job description and make sure to attach relevant documents.

The mission of the Allen Institute for Brain Science is to accelerate the understanding of how the human brain works in health and disease.

Using a big science approach, we generate useful public resources, drive technological and analytical advances, and discover fundamental brain properties through integration of experiments, modeling and theory.

The Molecular Genetics department at the Allen Institute for Brain Science, led by Bosiljka Tasic, defines cell types in the mouse brain with single-cell genomics techniques and generates high-precision genetic tools to effectively identify, monitor, and manipulate distinct cell types within the mouse brain.

We seek an exceptional data analyst who will report to Molly Gasperini, an Assistant Investigator leading the department’s Genomics team, and will leverage genomics analysis and data visualization techniques on a variety of projects related to enhancer discovery and viral tool building to study novel cell types in the mouse brain.

The ideal candidate Data Analyst should have a strong background in computational biology, data visualization, neuroscience, gene regulation, and / or genomics.

They will work closely with team members to generate, analyze, and visualize various types of single-cell genomics data to systematically nominate enhancers, define neuronal types, and help design viral genetic tools.

This individual should be highly efficient, capable of working independently, and willing to collaborate with others.

This is a limited term position with an expected duration of 12 months. There may be the possibility of an extension based on business needs.

The Allen Institute believes that team science significantly benefits from the participation of diverse voices, experiences, and backgrounds.

High-quality science can only be produced when it includes different perspectives. We are committed to increasing diversity across every team and encourage people from all backgrounds to apply for this role.

Essential Functions

• Lead analysis and visualization of genomics datasets to define and nominate cell-type-defining enhancers in the mouse brain
• Design experiments for and process various types of neurogenomics and functional genomics data types (e.g. single-cell RNA-seq, single-cell ATAC-seq, single-cell multiome, ChIP-seq, Cut&Run, barcoded enhancer reporter screens)
• Work with team members to provide biological interpretation of the data and propose further experiments.
• Present research work regularly to internal stakeholders and the external community
• Note : Reasonable accommodations may be made to enable individuals with disabilities to perform the essential functions. This description reflects management’s assignment of essential functions;

it does not proscribe or restrict the tasks that may be assigned.

Required Education And Experience

• Bachelor's degree in Genomics, Computational Biology, Bioinformatics, Neuroscience or related field
• Minimum of 4 post-baccalaureate years of related data analysis experience
• Proficiency in programming languages and tools (R, Python, Linux shell scripting)
• Proficiency and passion for genomics data visualization
• Understanding of single-cell genomics and experience with genomics data analysis
• Experience in handling and analyzing large single-cell genomics (transcriptomics, epigenomics) datasets

Preferred Education And Experience

• Master’s Degree in Genomics, Computational Biology, Bioinformatics, Neuroscience or related field; or an equivalent combination of degree and experience
• 4 - 8 years of data analysis experience in Knowledge of mouse neuroanatomy
• Ability to work independently and within a collaborative, multi-disciplinary environment to meet aggressive timelines
• Positive attitude, self-motivated, and ability to troubleshoot
• Exceptional oral and written communication and organizational skills
• Strong publication record

Travel

Attendance and participation in national and international conferences may be required

Physical Demands

• Fine motor movements in fingers / hands to operate computers and other office equipment; repetitive motion with lab equipment
• Frequently required to sit, stand, walk, stoop, kneel or reach

Position Type / Expected Hours of Work

This role is currently able to work both remotely and onsite in a hybrid work environment working 80% onsite. We are a Washington State employer, and the primary work location for all Allen Institute employees is 615 Westlake Ave N.

any remote work must be performed in Washington State.

Additional Comments

• Please note, this opportunity offers relocation assistance
• Please note, this opportunity offers work visa sponsorship

Annualized Salary Range

• $88,450 - $123,850 *
• Final salary depends on required education for the role, experience, and level of skills relevant to the role, along with work location, where applicable.

Benefits

Employees (and their families) are eligible to enroll in benefits per eligibility rules outlined in the Allen Institute’s Benefits Guide.

These benefits include medical, dental, vision, and basic life insurance. Employees are also eligible to enroll in the Allen Institute’s 401k plan.

Paid time off is also available as outlined in the Allen Institutes Benefits Guide. Details on the Allen Institute’s benefits offering are located at the following link to the Benefits Guide : Benefits Guide.

It is the policy of the Allen Institute to provide equal employment opportunity (EEO) to all persons regardless of age, color, national origin, citizenship status, physical or mental disability, race, religion, creed, gender, sex, sexual orientation, gender identity and / or expression, genetic information, marital status, status with regard to public assistance, veteran status, or any other characteristic protected by federal, state or local law.

In addition, the Allen Institute will provide reasonable accommodations for qualified individuals with disabilities.

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